Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.86■■□□□ 1.09
Ecm1Q61508 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.86■■□□□ 1.09
Ecm1Q61508 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Ecm1Q61508 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Ecm1Q61508 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ecm1Q61508 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ecm1Q61508 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ecm1Q61508 Gm12527-201ENSMUST00000117967 564 ntBASIC21.85■■□□□ 1.09
Ecm1Q61508 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.85■■□□□ 1.09
Ecm1Q61508 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ecm1Q61508 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.85■■□□□ 1.09
Ecm1Q61508 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ecm1Q61508 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ecm1Q61508 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.84■■□□□ 1.09
Ecm1Q61508 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.84■■□□□ 1.09
Ecm1Q61508 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.84■■□□□ 1.09
Ecm1Q61508 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.84■■□□□ 1.09
Ecm1Q61508 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ecm1Q61508 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Ecm1Q61508 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ecm1Q61508 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ecm1Q61508 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.83■■□□□ 1.09
Ecm1Q61508 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.83■■□□□ 1.08
Ecm1Q61508 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ecm1Q61508 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ecm1Q61508 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ecm1Q61508 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.82■■□□□ 1.08
Ecm1Q61508 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.82■■□□□ 1.08
Ecm1Q61508 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.82■■□□□ 1.08
Ecm1Q61508 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.82■■□□□ 1.08
Ecm1Q61508 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ecm1Q61508 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ecm1Q61508 Gm20760-201ENSMUST00000179197 648 ntBASIC21.82■■□□□ 1.08
Ecm1Q61508 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ecm1Q61508 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ecm1Q61508 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ecm1Q61508 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ecm1Q61508 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.81■■□□□ 1.08
Ecm1Q61508 Gm5408-201ENSMUST00000197998 747 ntBASIC21.81■■□□□ 1.08
Ecm1Q61508 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ecm1Q61508 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ecm1Q61508 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.8■■□□□ 1.08
Ecm1Q61508 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ecm1Q61508 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ecm1Q61508 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ecm1Q61508 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.8■■□□□ 1.08
Ecm1Q61508 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.79■■□□□ 1.08
Ecm1Q61508 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ecm1Q61508 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ecm1Q61508 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.79■■□□□ 1.08
Ecm1Q61508 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.79■■□□□ 1.08
Ecm1Q61508 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ecm1Q61508 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ecm1Q61508 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.78■■□□□ 1.08
Ecm1Q61508 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ecm1Q61508 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ecm1Q61508 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ecm1Q61508 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.78■■□□□ 1.08
Ecm1Q61508 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ecm1Q61508 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ecm1Q61508 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ecm1Q61508 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ecm1Q61508 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ecm1Q61508 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.77■■□□□ 1.08
Ecm1Q61508 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ecm1Q61508 Gm6211-202ENSMUST00000167849 925 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms