Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itm2aQ61500 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Itm2aQ61500 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Itm2aQ61500 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Itm2aQ61500 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itm2aQ61500 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itm2aQ61500 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Itm2aQ61500 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itm2aQ61500 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itm2aQ61500 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itm2aQ61500 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Itm2aQ61500 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Gm40881-201ENSMUST00000223397 166 ntBASIC19.19■□□□□ 0.66
Itm2aQ61500 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Itm2aQ61500 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Itm2aQ61500 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Itm2aQ61500 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Itm2aQ61500 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.18■□□□□ 0.66
Itm2aQ61500 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Itm2aQ61500 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Itm2aQ61500 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
Itm2aQ61500 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itm2aQ61500 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Itm2aQ61500 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.17■□□□□ 0.66
Itm2aQ61500 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Itm2aQ61500 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.17■□□□□ 0.66
Itm2aQ61500 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.17■□□□□ 0.66
Itm2aQ61500 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Itm2aQ61500 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Itm2aQ61500 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itm2aQ61500 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Itm2aQ61500 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Itm2aQ61500 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Itm2aQ61500 Gm43530-201ENSMUST00000195920 274 ntBASIC19.16■□□□□ 0.66
Itm2aQ61500 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Itm2aQ61500 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itm2aQ61500 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.16■□□□□ 0.66
Itm2aQ61500 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Itm2aQ61500 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.15■□□□□ 0.66
Itm2aQ61500 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Itm2aQ61500 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Itm2aQ61500 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itm2aQ61500 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Itm2aQ61500 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Itm2aQ61500 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Itm2aQ61500 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Itm2aQ61500 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.14■□□□□ 0.65
Itm2aQ61500 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Itm2aQ61500 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
Itm2aQ61500 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms