Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sox17Q61473 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Sox17Q61473 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox17Q61473 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Sox17Q61473 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sox17Q61473 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sox17Q61473 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.31■□□□□ 0.52
Sox17Q61473 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.31■□□□□ 0.52
Sox17Q61473 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox17Q61473 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sox17Q61473 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sox17Q61473 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox17Q61473 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.3■□□□□ 0.52
Sox17Q61473 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sox17Q61473 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.29■□□□□ 0.52
Sox17Q61473 Gm45444-201ENSMUST00000211394 898 ntBASIC18.29■□□□□ 0.52
Sox17Q61473 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sox17Q61473 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox17Q61473 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sox17Q61473 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.28■□□□□ 0.52
Sox17Q61473 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Gm13238-201ENSMUST00000117655 780 ntBASIC18.28■□□□□ 0.52
Sox17Q61473 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.28■□□□□ 0.52
Sox17Q61473 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.28■□□□□ 0.52
Sox17Q61473 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Sox17Q61473 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox17Q61473 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Sox17Q61473 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sox17Q61473 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sox17Q61473 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.27■□□□□ 0.52
Sox17Q61473 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox17Q61473 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.27■□□□□ 0.51
Sox17Q61473 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sox17Q61473 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sox17Q61473 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.26■□□□□ 0.51
Sox17Q61473 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.26■□□□□ 0.51
Sox17Q61473 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sox17Q61473 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sox17Q61473 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.26■□□□□ 0.51
Sox17Q61473 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox17Q61473 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sox17Q61473 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox17Q61473 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.25■□□□□ 0.51
Sox17Q61473 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Sox17Q61473 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sox17Q61473 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox17Q61473 Gm7143-201ENSMUST00000222811 859 ntBASIC18.25■□□□□ 0.51
Sox17Q61473 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.25■□□□□ 0.51
Sox17Q61473 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms