Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Six4Q61321 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.81■□□□□ 0.76
Six4Q61321 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.81■□□□□ 0.76
Six4Q61321 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six4Q61321 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.8■□□□□ 0.76
Six4Q61321 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Six4Q61321 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Six4Q61321 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six4Q61321 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Six4Q61321 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.79■□□□□ 0.76
Six4Q61321 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Six4Q61321 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.79■□□□□ 0.76
Six4Q61321 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Six4Q61321 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Six4Q61321 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six4Q61321 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six4Q61321 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six4Q61321 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six4Q61321 Gm40848-201ENSMUST00000221998 324 ntBASIC19.78■□□□□ 0.76
Six4Q61321 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Six4Q61321 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six4Q61321 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six4Q61321 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Six4Q61321 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Six4Q61321 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Six4Q61321 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Six4Q61321 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.76■□□□□ 0.75
Six4Q61321 Gm26833-201ENSMUST00000180899 440 ntBASIC19.76■□□□□ 0.75
Six4Q61321 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Six4Q61321 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six4Q61321 Notumos-201ENSMUST00000151998 2659 ntBASIC19.76■□□□□ 0.75
Six4Q61321 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Six4Q61321 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Six4Q61321 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.75■□□□□ 0.75
Six4Q61321 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Six4Q61321 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six4Q61321 Golph3-202ENSMUST00000226517 2359 ntBASIC19.75■□□□□ 0.75
Six4Q61321 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Six4Q61321 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 Gm11421-201ENSMUST00000122124 294 ntBASIC19.74■□□□□ 0.75
Six4Q61321 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six4Q61321 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Six4Q61321 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.73■□□□□ 0.75
Six4Q61321 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.73■□□□□ 0.75
Six4Q61321 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.73■□□□□ 0.75
Six4Q61321 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.73■□□□□ 0.75
Six4Q61321 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Six4Q61321 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six4Q61321 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Six4Q61321 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Six4Q61321 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.72■□□□□ 0.75
Six4Q61321 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms