Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1eQ61290 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cacna1eQ61290 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.38■□□□□ 0.69
Cacna1eQ61290 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1eQ61290 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.37■□□□□ 0.69
Cacna1eQ61290 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.37■□□□□ 0.69
Cacna1eQ61290 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cacna1eQ61290 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Gm6420-201ENSMUST00000193885 723 ntBASIC19.36■□□□□ 0.69
Cacna1eQ61290 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.36■□□□□ 0.69
Cacna1eQ61290 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.36■□□□□ 0.69
Cacna1eQ61290 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.36■□□□□ 0.69
Cacna1eQ61290 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1eQ61290 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1eQ61290 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1eQ61290 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1eQ61290 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1eQ61290 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1eQ61290 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1eQ61290 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.33■□□□□ 0.69
Cacna1eQ61290 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cacna1eQ61290 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.33■□□□□ 0.69
Cacna1eQ61290 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.33■□□□□ 0.68
Cacna1eQ61290 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.33■□□□□ 0.68
Cacna1eQ61290 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1eQ61290 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Cacna1eQ61290 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1eQ61290 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1eQ61290 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna1eQ61290 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.32■□□□□ 0.68
Cacna1eQ61290 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Cacna1eQ61290 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.32■□□□□ 0.68
Cacna1eQ61290 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1eQ61290 AA386476-201ENSMUST00000098781 1665 ntBASIC19.32■□□□□ 0.68
Cacna1eQ61290 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1eQ61290 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms