Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sdf4Q61112 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdf4Q61112 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
Sdf4Q61112 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Gm12251-201ENSMUST00000117893 792 ntBASIC19.8■□□□□ 0.76
Sdf4Q61112 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sdf4Q61112 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdf4Q61112 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdf4Q61112 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Sdf4Q61112 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.79■□□□□ 0.76
Sdf4Q61112 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.79■□□□□ 0.76
Sdf4Q61112 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sdf4Q61112 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sdf4Q61112 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdf4Q61112 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sdf4Q61112 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 AA386476-201ENSMUST00000098781 1665 ntBASIC19.78■□□□□ 0.76
Sdf4Q61112 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Gm45417-201ENSMUST00000209533 758 ntBASIC19.78■□□□□ 0.76
Sdf4Q61112 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.78■□□□□ 0.76
Sdf4Q61112 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdf4Q61112 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.77■□□□□ 0.76
Sdf4Q61112 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdf4Q61112 Gm8493-201ENSMUST00000196881 489 ntBASIC19.77■□□□□ 0.76
Sdf4Q61112 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.77■□□□□ 0.76
Sdf4Q61112 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdf4Q61112 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
Sdf4Q61112 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.77■□□□□ 0.76
Sdf4Q61112 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdf4Q61112 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.77■□□□□ 0.76
Sdf4Q61112 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sdf4Q61112 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.76■□□□□ 0.75
Sdf4Q61112 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Sdf4Q61112 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdf4Q61112 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sdf4Q61112 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.75■□□□□ 0.75
Sdf4Q61112 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.75■□□□□ 0.75
Sdf4Q61112 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdf4Q61112 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms