Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn11Q60771 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cldn11Q60771 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cldn11Q60771 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Gm42642-201ENSMUST00000200683 355 ntBASIC20.29■□□□□ 0.84
Cldn11Q60771 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn11Q60771 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.28■□□□□ 0.84
Cldn11Q60771 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.28■□□□□ 0.84
Cldn11Q60771 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.28■□□□□ 0.84
Cldn11Q60771 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn11Q60771 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cldn11Q60771 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn11Q60771 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
Cldn11Q60771 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Cldn11Q60771 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn11Q60771 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldn11Q60771 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn11Q60771 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldn11Q60771 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn11Q60771 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn11Q60771 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn11Q60771 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn11Q60771 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn11Q60771 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.25■□□□□ 0.83
Cldn11Q60771 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn11Q60771 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn11Q60771 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cldn11Q60771 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cldn11Q60771 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Gm42778-201ENSMUST00000199644 553 ntBASIC20.24■□□□□ 0.83
Cldn11Q60771 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Cldn11Q60771 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.24■□□□□ 0.83
Cldn11Q60771 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Gm9988-201ENSMUST00000069786 435 ntBASIC20.24■□□□□ 0.83
Cldn11Q60771 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Cldn11Q60771 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn11Q60771 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn11Q60771 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cldn11Q60771 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn11Q60771 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn11Q60771 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn11Q60771 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn11Q60771 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cldn11Q60771 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn11Q60771 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn11Q60771 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.21■□□□□ 0.83
Cldn11Q60771 Gm18671-201ENSMUST00000214826 683 ntBASIC20.21■□□□□ 0.83
Cldn11Q60771 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.21■□□□□ 0.83
Cldn11Q60771 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn11Q60771 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn11Q60771 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn11Q60771 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn11Q60771 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Cldn11Q60771 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn11Q60771 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms