Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClpbQ60649 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.72■□□□□ 0.59
ClpbQ60649 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpbQ60649 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ClpbQ60649 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpbQ60649 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ClpbQ60649 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ClpbQ60649 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
ClpbQ60649 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.71■□□□□ 0.59
ClpbQ60649 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ClpbQ60649 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClpbQ60649 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.71■□□□□ 0.59
ClpbQ60649 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ClpbQ60649 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ClpbQ60649 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ClpbQ60649 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.7■□□□□ 0.58
ClpbQ60649 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClpbQ60649 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ClpbQ60649 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Mir6236-201ENSMUST00000184437 123 ntBASIC18.69■□□□□ 0.58
ClpbQ60649 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ClpbQ60649 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.69■□□□□ 0.58
ClpbQ60649 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClpbQ60649 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ClpbQ60649 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.68■□□□□ 0.58
ClpbQ60649 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.68■□□□□ 0.58
ClpbQ60649 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClpbQ60649 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ClpbQ60649 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.67■□□□□ 0.58
ClpbQ60649 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ClpbQ60649 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClpbQ60649 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ClpbQ60649 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Gm43017-201ENSMUST00000198296 752 ntBASIC18.66■□□□□ 0.58
ClpbQ60649 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.66■□□□□ 0.58
ClpbQ60649 Spcs1-204ENSMUST00000226782 949 ntBASIC18.66■□□□□ 0.58
ClpbQ60649 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.66■□□□□ 0.58
ClpbQ60649 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ClpbQ60649 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClpbQ60649 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ClpbQ60649 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ClpbQ60649 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClpbQ60649 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms