Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3-1Q5R1I8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-1Q5R1I8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-1Q5R1I8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3-1Q5R1I8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3-1Q5R1I8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trav3-1Q5R1I8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Haglr-201ENSMUST00000100000 2085 ntBASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3-1Q5R1I8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav3-1Q5R1I8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms