Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8d-1Q5R1H8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-1Q5R1H8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Etf1-202ENSMUST00000180351 108 ntBASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-1Q5R1H8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Gm40881-201ENSMUST00000223397 166 ntBASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav8d-1Q5R1H8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Gm7417-201ENSMUST00000192950 473 ntBASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav8d-1Q5R1H8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Gm45102-201ENSMUST00000207427 857 ntBASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-1Q5R1H8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav8d-1Q5R1H8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Gm9959-201ENSMUST00000068277 390 ntBASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms