Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Gm11687-201ENSMUST00000118911 886 ntBASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.62□□□□□ -0.07
Trav3-3Q5R1C3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Scarna2-201ENSMUST00000157560 414 ntBASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav3-3Q5R1C3 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Fst-202ENSMUST00000223640 2612 ntBASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-3Q5R1C3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-3Q5R1C3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-3Q5R1C3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav3-3Q5R1C3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-3Q5R1C3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-3Q5R1C3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav3-3Q5R1C3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms