Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.94■□□□□ 0.78
Rnf43Q5NCP0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.94■□□□□ 0.78
Rnf43Q5NCP0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf43Q5NCP0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf43Q5NCP0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf43Q5NCP0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf43Q5NCP0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Gm13146-201ENSMUST00000118508 780 ntBASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Gm10653-202ENSMUST00000139570 835 ntBASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf43Q5NCP0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rnf43Q5NCP0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf43Q5NCP0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rnf43Q5NCP0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rnf43Q5NCP0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Rnf43Q5NCP0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf43Q5NCP0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf43Q5NCP0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf43Q5NCP0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf43Q5NCP0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf43Q5NCP0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf43Q5NCP0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Gm20760-201ENSMUST00000179197 648 ntBASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf43Q5NCP0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Gm7290-201ENSMUST00000104990 617 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Gm12918-201ENSMUST00000120234 636 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Gm15710-201ENSMUST00000121821 636 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Gm5075-201ENSMUST00000196916 622 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms