Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rc3h1Q4VGL6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.23
Rc3h1Q4VGL6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.7■■□□□ 1.22
Rc3h1Q4VGL6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rc3h1Q4VGL6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rc3h1Q4VGL6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rc3h1Q4VGL6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rc3h1Q4VGL6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rc3h1Q4VGL6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rc3h1Q4VGL6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Gm37179-201ENSMUST00000194862 823 ntBASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rc3h1Q4VGL6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Gm13234-201ENSMUST00000120010 747 ntBASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.65■■□□□ 1.22
Rc3h1Q4VGL6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rc3h1Q4VGL6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rc3h1Q4VGL6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rc3h1Q4VGL6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rc3h1Q4VGL6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rc3h1Q4VGL6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rc3h1Q4VGL6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms