Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Gm43403-201ENSMUST00000198011 1786 ntBASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pds5bQ4VA53 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC34.87■■■■□ 3.17
Pds5bQ4VA53 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC34.87■■■■□ 3.17
Pds5bQ4VA53 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Pds5bQ4VA53 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Pds5bQ4VA53 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC34.86■■■■□ 3.17
Pds5bQ4VA53 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC34.86■■■■□ 3.17
Pds5bQ4VA53 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Gm13509-201ENSMUST00000119733 1308 ntBASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Gm10231-201ENSMUST00000181584 441 ntBASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Gm10175-202ENSMUST00000208752 441 ntBASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC34.85■■■■□ 3.17
Pds5bQ4VA53 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Pds5bQ4VA53 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Pds5bQ4VA53 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Pds5bQ4VA53 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Pds5bQ4VA53 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC34.83■■■■□ 3.17
Pds5bQ4VA53 AC153881.2-201ENSMUST00000214877 204 ntBASIC34.83■■■■□ 3.17
Pds5bQ4VA53 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Pds5bQ4VA53 Gm42911-201ENSMUST00000199360 1630 ntBASIC34.83■■■■□ 3.17
Pds5bQ4VA53 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Pds5bQ4VA53 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC34.82■■■■□ 3.17
Pds5bQ4VA53 Gm18666-201ENSMUST00000190039 958 ntBASIC34.82■■■■□ 3.17
Pds5bQ4VA53 Gm10819-201ENSMUST00000099988 561 ntBASIC34.82■■■■□ 3.17
Pds5bQ4VA53 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Pds5bQ4VA53 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Pds5bQ4VA53 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Pds5bQ4VA53 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Pds5bQ4VA53 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
Pds5bQ4VA53 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Pds5bQ4VA53 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Pds5bQ4VA53 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Pds5bQ4VA53 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pds5bQ4VA53 Gm21596-201ENSMUST00000178049 1316 ntBASIC34.78■■■■□ 3.16
Pds5bQ4VA53 AC153962.1-201ENSMUST00000218530 1948 ntBASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC34.78■■■■□ 3.16
Pds5bQ4VA53 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Pds5bQ4VA53 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Pds5bQ4VA53 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Pds5bQ4VA53 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
Pds5bQ4VA53 Gm11249-201ENSMUST00000117071 859 ntBASIC34.74■■■■□ 3.15
Pds5bQ4VA53 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Pds5bQ4VA53 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Pds5bQ4VA53 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC34.73■■■■□ 3.15
Pds5bQ4VA53 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC34.72■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms