Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc2Q4U2R1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Herc2Q4U2R1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Gm44771-201ENSMUST00000206975 626 ntBASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Herc2Q4U2R1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Gm7889-201ENSMUST00000185591 958 ntBASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc2Q4U2R1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc2Q4U2R1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.9□□□□□ -0.51
Herc2Q4U2R1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Herc2Q4U2R1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Herc2Q4U2R1 Gm23634-201ENSMUST00000175071 91 ntBASIC11.9□□□□□ -0.51
Herc2Q4U2R1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.9□□□□□ -0.51
Herc2Q4U2R1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC11.9□□□□□ -0.51
Herc2Q4U2R1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Gm33142-201ENSMUST00000193913 867 ntBASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc2Q4U2R1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gm2559-201ENSMUST00000201323 363 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms