Protein–RNA interactions for Protein: Q3UPL0

Sec31a, Protein transport protein Sec31A, mousemouse

Known RBP Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec31aQ3UPL0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec31aQ3UPL0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec31aQ3UPL0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.93■□□□□ 0.94
Sec31aQ3UPL0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sec31aQ3UPL0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec31aQ3UPL0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec31aQ3UPL0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sec31aQ3UPL0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sec31aQ3UPL0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sec31aQ3UPL0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.89■□□□□ 0.94
Sec31aQ3UPL0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sec31aQ3UPL0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec31aQ3UPL0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sec31aQ3UPL0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sec31aQ3UPL0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms