Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Naf1Q3UMQ8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Naf1Q3UMQ8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Naf1Q3UMQ8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Naf1Q3UMQ8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Gm27801-201ENSMUST00000184174 223 ntBASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Naf1Q3UMQ8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Naf1Q3UMQ8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Naf1Q3UMQ8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Naf1Q3UMQ8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Gm18671-201ENSMUST00000214826 683 ntBASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Naf1Q3UMQ8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Naf1Q3UMQ8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Naf1Q3UMQ8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Naf1Q3UMQ8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Naf1Q3UMQ8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Naf1Q3UMQ8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 AV356131-201ENSMUST00000206201 750 ntBASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms