Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Gm10033-202ENSMUST00000211874 928 ntBASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smcr8Q3UMB5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smcr8Q3UMB5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 AV356131-201ENSMUST00000206201 750 ntBASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smcr8Q3UMB5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smcr8Q3UMB5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Smcr8Q3UMB5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smcr8Q3UMB5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smcr8Q3UMB5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smcr8Q3UMB5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Gm37179-201ENSMUST00000194862 823 ntBASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smcr8Q3UMB5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smcr8Q3UMB5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms