Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdk1Q3UH53 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdk1Q3UH53 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdk1Q3UH53 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdk1Q3UH53 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Gm13534-201ENSMUST00000121169 513 ntBASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Gm6576-201ENSMUST00000169678 883 ntBASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sdk1Q3UH53 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Gm27275-201ENSMUST00000184318 272 ntBASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Gm38205-201ENSMUST00000192243 258 ntBASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdk1Q3UH53 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sdk1Q3UH53 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Gm15565-201ENSMUST00000118890 427 ntBASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sdk1Q3UH53 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdk1Q3UH53 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdk1Q3UH53 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Sdk1Q3UH53 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdk1Q3UH53 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdk1Q3UH53 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdk1Q3UH53 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdk1Q3UH53 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sdk1Q3UH53 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdk1Q3UH53 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms