Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Carmil3Q3UFQ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Carmil3Q3UFQ8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Carmil3Q3UFQ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Carmil3Q3UFQ8 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.68■■□□□ 1.38
Carmil3Q3UFQ8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Carmil3Q3UFQ8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.66■■□□□ 1.38
Carmil3Q3UFQ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Mir5133-201ENSMUST00000174955 77 ntBASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Carmil3Q3UFQ8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.64■■□□□ 1.38
Carmil3Q3UFQ8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Carmil3Q3UFQ8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.64■■□□□ 1.37
Carmil3Q3UFQ8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Carmil3Q3UFQ8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.64■■□□□ 1.37
Carmil3Q3UFQ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.64■■□□□ 1.37
Carmil3Q3UFQ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.63■■□□□ 1.37
Carmil3Q3UFQ8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.62■■□□□ 1.37
Carmil3Q3UFQ8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Carmil3Q3UFQ8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Carmil3Q3UFQ8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Carmil3Q3UFQ8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Carmil3Q3UFQ8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Gm13146-201ENSMUST00000118508 780 ntBASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Gm12441-201ENSMUST00000121806 588 ntBASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Carmil3Q3UFQ8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.6■■□□□ 1.37
Carmil3Q3UFQ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Carmil3Q3UFQ8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.58■■□□□ 1.37
Carmil3Q3UFQ8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms