Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cln6Q3U466 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cln6Q3U466 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cln6Q3U466 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cln6Q3U466 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.61■□□□□ 0.25
Cln6Q3U466 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cln6Q3U466 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cln6Q3U466 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cln6Q3U466 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cln6Q3U466 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Gm40881-201ENSMUST00000223397 166 ntBASIC16.6■□□□□ 0.25
Cln6Q3U466 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.6■□□□□ 0.25
Cln6Q3U466 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cln6Q3U466 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.6■□□□□ 0.25
Cln6Q3U466 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cln6Q3U466 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.59■□□□□ 0.25
Cln6Q3U466 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cln6Q3U466 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cln6Q3U466 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cln6Q3U466 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cln6Q3U466 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cln6Q3U466 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cln6Q3U466 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cln6Q3U466 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cln6Q3U466 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cln6Q3U466 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.58■□□□□ 0.24
Cln6Q3U466 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cln6Q3U466 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cln6Q3U466 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.57■□□□□ 0.24
Cln6Q3U466 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cln6Q3U466 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.57■□□□□ 0.24
Cln6Q3U466 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cln6Q3U466 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cln6Q3U466 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.56■□□□□ 0.24
Cln6Q3U466 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.56■□□□□ 0.24
Cln6Q3U466 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Cln6Q3U466 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cln6Q3U466 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.55■□□□□ 0.24
Cln6Q3U466 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.55■□□□□ 0.24
Cln6Q3U466 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.55■□□□□ 0.24
Cln6Q3U466 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
Cln6Q3U466 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cln6Q3U466 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms