Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cul4aQ3TCH7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cul4aQ3TCH7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cul4aQ3TCH7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cul4aQ3TCH7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Cul4aQ3TCH7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cul4aQ3TCH7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cul4aQ3TCH7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cul4aQ3TCH7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cul4aQ3TCH7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Cul4aQ3TCH7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
Cul4aQ3TCH7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cul4aQ3TCH7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cul4aQ3TCH7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cul4aQ3TCH7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms