Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Gm10571-201ENSMUST00000097869 1638 ntBASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ush2AQ2QI47 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ush2AQ2QI47 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ush2AQ2QI47 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.69□□□□□ -0.7
Ush2AQ2QI47 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 AA414768-201ENSMUST00000121924 1257 ntBASIC10.69□□□□□ -0.7
Ush2AQ2QI47 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ush2AQ2QI47 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Gm13559-201ENSMUST00000120476 863 ntBASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Gm10013-201ENSMUST00000106074 672 ntBASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ush2AQ2QI47 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Gm2559-201ENSMUST00000201323 363 ntBASIC10.67□□□□□ -0.7
Ush2AQ2QI47 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ush2AQ2QI47 Gm7063-201ENSMUST00000186840 981 ntBASIC10.66□□□□□ -0.7
Ush2AQ2QI47 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms