Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Chd8Q09XV5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd8Q09XV5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd8Q09XV5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd8Q09XV5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd8Q09XV5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd8Q09XV5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd8Q09XV5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd8Q09XV5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chd8Q09XV5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.77■□□□□ 0.43
Chd8Q09XV5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd8Q09XV5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd8Q09XV5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd8Q09XV5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chd8Q09XV5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd8Q09XV5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd8Q09XV5 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.76■□□□□ 0.43
Chd8Q09XV5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 AA414768-201ENSMUST00000121924 1257 ntBASIC17.75■□□□□ 0.43
Chd8Q09XV5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd8Q09XV5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.74■□□□□ 0.43
Chd8Q09XV5 Gm6443-201ENSMUST00000203599 874 ntBASIC17.74■□□□□ 0.43
Chd8Q09XV5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd8Q09XV5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd8Q09XV5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Gm13559-201ENSMUST00000120476 863 ntBASIC17.73■□□□□ 0.43
Chd8Q09XV5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.73■□□□□ 0.43
Chd8Q09XV5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd8Q09XV5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd8Q09XV5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd8Q09XV5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd8Q09XV5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd8Q09XV5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd8Q09XV5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd8Q09XV5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.72■□□□□ 0.43
Chd8Q09XV5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Chd8Q09XV5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd8Q09XV5 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms