Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Hoxc4Q08624 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Gm13146-201ENSMUST00000118508 780 ntBASIC18.89■□□□□ 0.61
Hoxc4Q08624 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc4Q08624 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc4Q08624 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.87■□□□□ 0.61
Hoxc4Q08624 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Hoxc4Q08624 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc4Q08624 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc4Q08624 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc4Q08624 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc4Q08624 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc4Q08624 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hoxc4Q08624 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc4Q08624 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hoxc4Q08624 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc4Q08624 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc4Q08624 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc4Q08624 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.84■□□□□ 0.61
Hoxc4Q08624 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc4Q08624 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Hoxc4Q08624 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc4Q08624 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hoxc4Q08624 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Gm7514-201ENSMUST00000209475 934 ntBASIC18.83■□□□□ 0.6
Hoxc4Q08624 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc4Q08624 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc4Q08624 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.82■□□□□ 0.6
Hoxc4Q08624 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Hoxc4Q08624 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc4Q08624 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.82■□□□□ 0.6
Hoxc4Q08624 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.82■□□□□ 0.6
Hoxc4Q08624 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms