Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.96■□□□□ 0.47
SgcdP82347 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SgcdP82347 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcdP82347 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SgcdP82347 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcdP82347 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SgcdP82347 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SgcdP82347 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SgcdP82347 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SgcdP82347 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcdP82347 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SgcdP82347 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SgcdP82347 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SgcdP82347 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
SgcdP82347 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.94■□□□□ 0.46
SgcdP82347 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SgcdP82347 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SgcdP82347 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SgcdP82347 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.93■□□□□ 0.46
SgcdP82347 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SgcdP82347 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SgcdP82347 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcdP82347 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SgcdP82347 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.92■□□□□ 0.46
SgcdP82347 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.92■□□□□ 0.46
SgcdP82347 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.92■□□□□ 0.46
SgcdP82347 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SgcdP82347 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
SgcdP82347 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcdP82347 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.91■□□□□ 0.46
SgcdP82347 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.91■□□□□ 0.46
SgcdP82347 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SgcdP82347 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.91■□□□□ 0.46
SgcdP82347 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcdP82347 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SgcdP82347 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.9■□□□□ 0.46
SgcdP82347 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SgcdP82347 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.9■□□□□ 0.46
SgcdP82347 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.9■□□□□ 0.46
SgcdP82347 Serp2-204ENSMUST00000228055 705 ntBASIC17.9■□□□□ 0.46
SgcdP82347 Gm9847-201ENSMUST00000052528 599 ntBASIC17.9■□□□□ 0.46
SgcdP82347 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SgcdP82347 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms