Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb1P70662 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb1P70662 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.47■□□□□ 0.71
Ldb1P70662 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb1P70662 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb1P70662 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb1P70662 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb1P70662 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb1P70662 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb1P70662 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb1P70662 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ldb1P70662 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.46■□□□□ 0.71
Ldb1P70662 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb1P70662 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ldb1P70662 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ldb1P70662 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ldb1P70662 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.45■□□□□ 0.7
Ldb1P70662 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.45■□□□□ 0.7
Ldb1P70662 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb1P70662 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ldb1P70662 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ldb1P70662 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ldb1P70662 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ldb1P70662 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.44■□□□□ 0.7
Ldb1P70662 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb1P70662 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.43■□□□□ 0.7
Ldb1P70662 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ldb1P70662 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.43■□□□□ 0.7
Ldb1P70662 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ldb1P70662 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb1P70662 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb1P70662 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb1P70662 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb1P70662 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ldb1P70662 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb1P70662 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb1P70662 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ldb1P70662 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.41■□□□□ 0.7
Ldb1P70662 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ldb1P70662 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 AA386476-201ENSMUST00000098781 1665 ntBASIC19.41■□□□□ 0.7
Ldb1P70662 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.41■□□□□ 0.7
Ldb1P70662 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.41■□□□□ 0.7
Ldb1P70662 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ldb1P70662 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ldb1P70662 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb1P70662 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ldb1P70662 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ldb1P70662 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb1P70662 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb1P70662 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ldb1P70662 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ldb1P70662 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ldb1P70662 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Gm12251-201ENSMUST00000117893 792 ntBASIC19.39■□□□□ 0.69
Ldb1P70662 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Ldb1P70662 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ldb1P70662 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb1P70662 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.38■□□□□ 0.69
Ldb1P70662 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb1P70662 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.38■□□□□ 0.69
Ldb1P70662 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb1P70662 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.38■□□□□ 0.69
Ldb1P70662 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb1P70662 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ldb1P70662 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ldb1P70662 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms