Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.25■□□□□ 0.67
Crnkl1P63154 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.25■□□□□ 0.67
Crnkl1P63154 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Crnkl1P63154 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Crnkl1P63154 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.24■□□□□ 0.67
Crnkl1P63154 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Crnkl1P63154 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Crnkl1P63154 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Crnkl1P63154 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crnkl1P63154 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crnkl1P63154 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Crnkl1P63154 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crnkl1P63154 Gm10232-201ENSMUST00000089221 720 ntBASIC19.23■□□□□ 0.67
Crnkl1P63154 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crnkl1P63154 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crnkl1P63154 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.23■□□□□ 0.67
Crnkl1P63154 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Crnkl1P63154 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Crnkl1P63154 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.22■□□□□ 0.67
Crnkl1P63154 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crnkl1P63154 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.21■□□□□ 0.67
Crnkl1P63154 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Crnkl1P63154 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crnkl1P63154 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
Crnkl1P63154 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.2■□□□□ 0.66
Crnkl1P63154 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.2■□□□□ 0.66
Crnkl1P63154 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.2■□□□□ 0.66
Crnkl1P63154 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Crnkl1P63154 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crnkl1P63154 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Crnkl1P63154 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.19■□□□□ 0.66
Crnkl1P63154 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Crnkl1P63154 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Crnkl1P63154 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crnkl1P63154 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Crnkl1P63154 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crnkl1P63154 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Crnkl1P63154 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.17■□□□□ 0.66
Crnkl1P63154 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crnkl1P63154 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Crnkl1P63154 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms