Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn18P56857 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn18P56857 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn18P56857 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn18P56857 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn18P56857 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Cldn18P56857 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Cldn18P56857 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cldn18P56857 Gm26833-201ENSMUST00000180899 440 ntBASIC17.55■□□□□ 0.4
Cldn18P56857 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.55■□□□□ 0.4
Cldn18P56857 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn18P56857 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn18P56857 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cldn18P56857 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn18P56857 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn18P56857 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn18P56857 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.54■□□□□ 0.4
Cldn18P56857 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn18P56857 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Gm11421-201ENSMUST00000122124 294 ntBASIC17.53■□□□□ 0.4
Cldn18P56857 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.53■□□□□ 0.4
Cldn18P56857 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn18P56857 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.53■□□□□ 0.4
Cldn18P56857 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn18P56857 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn18P56857 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.52■□□□□ 0.4
Cldn18P56857 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.52■□□□□ 0.4
Cldn18P56857 Gm40848-201ENSMUST00000221998 324 ntBASIC17.52■□□□□ 0.4
Cldn18P56857 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn18P56857 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Cldn18P56857 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn18P56857 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn18P56857 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn18P56857 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn18P56857 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.51■□□□□ 0.39
Cldn18P56857 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn18P56857 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn18P56857 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Cldn18P56857 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn18P56857 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn18P56857 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
Cldn18P56857 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.5■□□□□ 0.39
Cldn18P56857 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn18P56857 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cldn18P56857 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.5■□□□□ 0.39
Cldn18P56857 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.5■□□□□ 0.39
Cldn18P56857 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn18P56857 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cldn18P56857 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn18P56857 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn18P56857 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn18P56857 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn18P56857 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn18P56857 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cldn18P56857 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn18P56857 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn18P56857 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn18P56857 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.49■□□□□ 0.39
Cldn18P56857 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cldn18P56857 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cldn18P56857 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn18P56857 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn18P56857 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.48■□□□□ 0.39
Cldn18P56857 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn18P56857 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn18P56857 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Cldn18P56857 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms