Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh11P55288 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdh11P55288 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh11P55288 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Cdh11P55288 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh11P55288 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cdh11P55288 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh11P55288 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh11P55288 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdh11P55288 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.7■□□□□ 0.42
Cdh11P55288 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh11P55288 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh11P55288 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdh11P55288 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh11P55288 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh11P55288 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdh11P55288 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdh11P55288 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdh11P55288 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Gm9870-201ENSMUST00000063874 645 ntBASIC17.69■□□□□ 0.42
Cdh11P55288 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh11P55288 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh11P55288 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdh11P55288 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh11P55288 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh11P55288 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Cdh11P55288 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Gm27454-201ENSMUST00000185090 204 ntBASIC17.67■□□□□ 0.42
Cdh11P55288 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.67■□□□□ 0.42
Cdh11P55288 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cdh11P55288 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh11P55288 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh11P55288 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Cdh11P55288 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh11P55288 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh11P55288 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdh11P55288 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Cdh11P55288 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh11P55288 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdh11P55288 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh11P55288 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh11P55288 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh11P55288 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cdh11P55288 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh11P55288 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh11P55288 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms