Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Gm8493-201ENSMUST00000196881 489 ntBASIC21.02■□□□□ 0.96
Nub1P54729 Gm43173-201ENSMUST00000202246 593 ntBASIC21.02■□□□□ 0.96
Nub1P54729 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nub1P54729 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Nub1P54729 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.01■□□□□ 0.95
Nub1P54729 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.01■□□□□ 0.95
Nub1P54729 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nub1P54729 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.01■□□□□ 0.95
Nub1P54729 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nub1P54729 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nub1P54729 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nub1P54729 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nub1P54729 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21■□□□□ 0.95
Nub1P54729 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nub1P54729 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Nub1P54729 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nub1P54729 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Nub1P54729 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Nub1P54729 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.99■□□□□ 0.95
Nub1P54729 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.99■□□□□ 0.95
Nub1P54729 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Nub1P54729 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nub1P54729 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.98■□□□□ 0.95
Nub1P54729 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nub1P54729 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nub1P54729 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nub1P54729 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nub1P54729 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Nub1P54729 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Nub1P54729 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nub1P54729 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
Nub1P54729 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.96■□□□□ 0.95
Nub1P54729 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nub1P54729 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nub1P54729 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nub1P54729 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nub1P54729 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nub1P54729 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nub1P54729 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Nub1P54729 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.95■□□□□ 0.94
Nub1P54729 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.95■□□□□ 0.94
Nub1P54729 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Nub1P54729 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nub1P54729 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.94■□□□□ 0.94
Nub1P54729 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.94■□□□□ 0.94
Nub1P54729 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Nub1P54729 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nub1P54729 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.94■□□□□ 0.94
Nub1P54729 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.94■□□□□ 0.94
Nub1P54729 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nub1P54729 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
Nub1P54729 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nub1P54729 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nub1P54729 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms