Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Msh6P54276 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Msh6P54276 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Msh6P54276 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Msh6P54276 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Msh6P54276 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC25.08■■□□□ 1.61
Msh6P54276 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.08■■□□□ 1.61
Msh6P54276 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Msh6P54276 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC25.07■■□□□ 1.6
Msh6P54276 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC25.07■■□□□ 1.6
Msh6P54276 Gm4968-201ENSMUST00000071458 858 ntBASIC25.07■■□□□ 1.6
Msh6P54276 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.07■■□□□ 1.6
Msh6P54276 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Msh6P54276 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Msh6P54276 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Msh6P54276 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Msh6P54276 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Msh6P54276 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Msh6P54276 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Msh6P54276 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Msh6P54276 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Msh6P54276 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Msh6P54276 Mir5133-201ENSMUST00000174955 77 ntBASIC25.05■■□□□ 1.6
Msh6P54276 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Msh6P54276 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Msh6P54276 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.04■■□□□ 1.6
Msh6P54276 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.04■■□□□ 1.6
Msh6P54276 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Msh6P54276 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.04■■□□□ 1.6
Msh6P54276 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.04■■□□□ 1.6
Msh6P54276 Gm10571-201ENSMUST00000097869 1638 ntBASIC25.03■■□□□ 1.6
Msh6P54276 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Msh6P54276 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Msh6P54276 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Msh6P54276 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Msh6P54276 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.03■■□□□ 1.6
Msh6P54276 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Msh6P54276 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Msh6P54276 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Msh6P54276 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC25.02■■□□□ 1.6
Msh6P54276 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Msh6P54276 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.01■■□□□ 1.59
Msh6P54276 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.01■■□□□ 1.59
Msh6P54276 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Msh6P54276 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
Msh6P54276 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Msh6P54276 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.01■■□□□ 1.59
Msh6P54276 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Msh6P54276 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Msh6P54276 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC25■■□□□ 1.59
Msh6P54276 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Msh6P54276 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25■■□□□ 1.59
Msh6P54276 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Msh6P54276 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Msh6P54276 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Msh6P54276 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.99■■□□□ 1.59
Msh6P54276 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.99■■□□□ 1.59
Msh6P54276 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Msh6P54276 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Msh6P54276 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Msh6P54276 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Msh6P54276 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Msh6P54276 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Msh6P54276 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Msh6P54276 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Msh6P54276 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.98■■□□□ 1.59
Msh6P54276 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.98■■□□□ 1.59
Msh6P54276 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.98■■□□□ 1.59
Msh6P54276 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.98■■□□□ 1.59
Msh6P54276 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.98■■□□□ 1.59
Msh6P54276 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Msh6P54276 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Msh6P54276 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Msh6P54276 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Msh6P54276 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Msh6P54276 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Msh6P54276 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms