Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SqleP52019 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SqleP52019 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
SqleP52019 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SqleP52019 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.38■■□□□ 1.01
SqleP52019 Gm715-201ENSMUST00000117865 831 ntBASIC21.38■■□□□ 1.01
SqleP52019 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SqleP52019 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.38■■□□□ 1.01
SqleP52019 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SqleP52019 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SqleP52019 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SqleP52019 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.37■■□□□ 1.01
SqleP52019 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SqleP52019 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Gm12896-201ENSMUST00000118430 226 ntBASIC21.36■■□□□ 1.01
SqleP52019 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.36■■□□□ 1.01
SqleP52019 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SqleP52019 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SqleP52019 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.35■■□□□ 1.01
SqleP52019 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.35■■□□□ 1.01
SqleP52019 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.35■■□□□ 1.01
SqleP52019 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.35■■□□□ 1.01
SqleP52019 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SqleP52019 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SqleP52019 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SqleP52019 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.34■■□□□ 1.01
SqleP52019 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SqleP52019 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SqleP52019 Gm11643-201ENSMUST00000119578 864 ntBASIC21.34■■□□□ 1.01
SqleP52019 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.34■■□□□ 1.01
SqleP52019 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SqleP52019 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SqleP52019 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SqleP52019 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SqleP52019 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SqleP52019 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SqleP52019 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.33■■□□□ 1.01
SqleP52019 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SqleP52019 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.33■■□□□ 1
SqleP52019 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.33■■□□□ 1
SqleP52019 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.33■■□□□ 1
SqleP52019 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SqleP52019 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SqleP52019 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.32■■□□□ 1
SqleP52019 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.32■■□□□ 1
SqleP52019 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SqleP52019 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SqleP52019 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.32■■□□□ 1
SqleP52019 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
SqleP52019 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SqleP52019 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.31■■□□□ 1
SqleP52019 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SqleP52019 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SqleP52019 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.3■■□□□ 1
SqleP52019 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SqleP52019 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SqleP52019 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SqleP52019 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SqleP52019 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.3■■□□□ 1
SqleP52019 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
SqleP52019 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SqleP52019 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.29■■□□□ 1
SqleP52019 Gm15565-201ENSMUST00000118890 427 ntBASIC21.29■■□□□ 1
SqleP52019 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.29■■□□□ 1
SqleP52019 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms