Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnfP51944 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnfP51944 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnfP51944 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CcnfP51944 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CcnfP51944 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CcnfP51944 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CcnfP51944 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnfP51944 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.63■□□□□ 0.57
CcnfP51944 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CcnfP51944 Gm43566-201ENSMUST00000196851 808 ntBASIC18.63■□□□□ 0.57
CcnfP51944 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnfP51944 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.63■□□□□ 0.57
CcnfP51944 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CcnfP51944 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CcnfP51944 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CcnfP51944 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CcnfP51944 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CcnfP51944 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.62■□□□□ 0.57
CcnfP51944 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.62■□□□□ 0.57
CcnfP51944 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnfP51944 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.61■□□□□ 0.57
CcnfP51944 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CcnfP51944 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CcnfP51944 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.6■□□□□ 0.57
CcnfP51944 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CcnfP51944 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.6■□□□□ 0.57
CcnfP51944 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CcnfP51944 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CcnfP51944 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.6■□□□□ 0.57
CcnfP51944 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CcnfP51944 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.59■□□□□ 0.57
CcnfP51944 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CcnfP51944 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CcnfP51944 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CcnfP51944 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CcnfP51944 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnfP51944 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.58■□□□□ 0.56
CcnfP51944 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnfP51944 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnfP51944 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CcnfP51944 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CcnfP51944 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
CcnfP51944 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CcnfP51944 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CcnfP51944 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.57■□□□□ 0.56
CcnfP51944 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 AA386476-201ENSMUST00000098781 1665 ntBASIC18.57■□□□□ 0.56
CcnfP51944 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CcnfP51944 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CcnfP51944 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CcnfP51944 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CcnfP51944 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CcnfP51944 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CcnfP51944 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms