Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccr1P51675 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ccr1P51675 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.36■■□□□ 1.01
Ccr1P51675 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccr1P51675 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr1P51675 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.35■■□□□ 1.01
Ccr1P51675 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.35■■□□□ 1.01
Ccr1P51675 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr1P51675 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr1P51675 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ccr1P51675 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr1P51675 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccr1P51675 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.34■■□□□ 1.01
Ccr1P51675 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccr1P51675 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccr1P51675 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.34■■□□□ 1.01
Ccr1P51675 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccr1P51675 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.33■■□□□ 1.01
Ccr1P51675 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Ccr1P51675 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ccr1P51675 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ccr1P51675 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccr1P51675 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccr1P51675 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.33■■□□□ 1
Ccr1P51675 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccr1P51675 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccr1P51675 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccr1P51675 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.32■■□□□ 1
Ccr1P51675 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.32■■□□□ 1
Ccr1P51675 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.32■■□□□ 1
Ccr1P51675 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ccr1P51675 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccr1P51675 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.31■■□□□ 1
Ccr1P51675 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.31■■□□□ 1
Ccr1P51675 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccr1P51675 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccr1P51675 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccr1P51675 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr1P51675 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Ccr1P51675 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.3■■□□□ 1
Ccr1P51675 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ccr1P51675 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ccr1P51675 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr1P51675 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr1P51675 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ccr1P51675 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccr1P51675 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Ccr1P51675 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr1P51675 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ccr1P51675 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.28■■□□□ 1
Ccr1P51675 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccr1P51675 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.28■■□□□ 1
Ccr1P51675 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr1P51675 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccr1P51675 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ccr1P51675 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccr1P51675 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.27■■□□□ 1
Ccr1P51675 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.27■■□□□ 1
Ccr1P51675 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr1P51675 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccr1P51675 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccr1P51675 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms