Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SftpbP50405 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.96■□□□□ 0.79
SftpbP50405 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SftpbP50405 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SftpbP50405 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.95■□□□□ 0.78
SftpbP50405 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SftpbP50405 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SftpbP50405 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
SftpbP50405 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SftpbP50405 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SftpbP50405 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.94■□□□□ 0.78
SftpbP50405 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
SftpbP50405 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
SftpbP50405 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SftpbP50405 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SftpbP50405 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SftpbP50405 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SftpbP50405 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SftpbP50405 Gm9959-201ENSMUST00000068277 390 ntBASIC19.93■□□□□ 0.78
SftpbP50405 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SftpbP50405 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SftpbP50405 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SftpbP50405 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SftpbP50405 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SftpbP50405 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.92■□□□□ 0.78
SftpbP50405 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.92■□□□□ 0.78
SftpbP50405 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SftpbP50405 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SftpbP50405 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.91■□□□□ 0.78
SftpbP50405 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SftpbP50405 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.91■□□□□ 0.78
SftpbP50405 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SftpbP50405 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SftpbP50405 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.91■□□□□ 0.78
SftpbP50405 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SftpbP50405 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SftpbP50405 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.9■□□□□ 0.78
SftpbP50405 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SftpbP50405 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.9■□□□□ 0.78
SftpbP50405 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SftpbP50405 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SftpbP50405 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SftpbP50405 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SftpbP50405 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SftpbP50405 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Gm22238-201ENSMUST00000175222 88 ntBASIC19.89■□□□□ 0.77
SftpbP50405 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SftpbP50405 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.89■□□□□ 0.77
SftpbP50405 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SftpbP50405 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.89■□□□□ 0.77
SftpbP50405 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SftpbP50405 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SftpbP50405 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
SftpbP50405 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SftpbP50405 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.87■□□□□ 0.77
SftpbP50405 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.87■□□□□ 0.77
SftpbP50405 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SftpbP50405 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.86■□□□□ 0.77
SftpbP50405 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SftpbP50405 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SftpbP50405 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms