Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.56■□□□□ 0.24
Ccl11P48298 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.56■□□□□ 0.24
Ccl11P48298 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl11P48298 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccl11P48298 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccl11P48298 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.56■□□□□ 0.24
Ccl11P48298 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.56■□□□□ 0.24
Ccl11P48298 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl11P48298 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl11P48298 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl11P48298 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.55■□□□□ 0.24
Ccl11P48298 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccl11P48298 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccl11P48298 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccl11P48298 Gm10033-202ENSMUST00000211874 928 ntBASIC16.55■□□□□ 0.24
Ccl11P48298 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccl11P48298 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ccl11P48298 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl11P48298 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 AV356131-201ENSMUST00000206201 750 ntBASIC16.54■□□□□ 0.24
Ccl11P48298 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccl11P48298 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Ccl11P48298 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.54■□□□□ 0.24
Ccl11P48298 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl11P48298 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
Ccl11P48298 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccl11P48298 Gm10849-201ENSMUST00000100397 618 ntBASIC16.53■□□□□ 0.24
Ccl11P48298 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccl11P48298 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccl11P48298 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Ccl11P48298 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl11P48298 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccl11P48298 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ccl11P48298 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccl11P48298 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccl11P48298 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl11P48298 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Ccl11P48298 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ccl11P48298 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccl11P48298 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccl11P48298 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccl11P48298 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccl11P48298 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Ccl11P48298 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccl11P48298 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccl11P48298 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccl11P48298 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccl11P48298 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccl11P48298 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccl11P48298 Reep4-203ENSMUST00000226563 1444 ntBASIC16.51■□□□□ 0.23
Ccl11P48298 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccl11P48298 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 AA386476-201ENSMUST00000098781 1665 ntBASIC16.5■□□□□ 0.23
Ccl11P48298 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccl11P48298 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.5■□□□□ 0.23
Ccl11P48298 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccl11P48298 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ccl11P48298 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccl11P48298 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccl11P48298 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ccl11P48298 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccl11P48298 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms