Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps4bP46467 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps4bP46467 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps4bP46467 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.77■□□□□ 0.76
Vps4bP46467 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps4bP46467 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.77■□□□□ 0.76
Vps4bP46467 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.77■□□□□ 0.76
Vps4bP46467 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps4bP46467 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Vps4bP46467 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Vps4bP46467 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps4bP46467 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Vps4bP46467 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps4bP46467 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps4bP46467 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Vps4bP46467 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vps4bP46467 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps4bP46467 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps4bP46467 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps4bP46467 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps4bP46467 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.75■□□□□ 0.75
Vps4bP46467 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.75■□□□□ 0.75
Vps4bP46467 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vps4bP46467 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps4bP46467 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.74■□□□□ 0.75
Vps4bP46467 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.74■□□□□ 0.75
Vps4bP46467 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps4bP46467 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps4bP46467 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps4bP46467 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps4bP46467 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps4bP46467 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Vps4bP46467 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.73■□□□□ 0.75
Vps4bP46467 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps4bP46467 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps4bP46467 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps4bP46467 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.72■□□□□ 0.75
Vps4bP46467 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps4bP46467 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps4bP46467 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps4bP46467 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Vps4bP46467 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Vps4bP46467 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Vps4bP46467 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.71■□□□□ 0.75
Vps4bP46467 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps4bP46467 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps4bP46467 AA386476-201ENSMUST00000098781 1665 ntBASIC19.71■□□□□ 0.75
Vps4bP46467 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vps4bP46467 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps4bP46467 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps4bP46467 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps4bP46467 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
Vps4bP46467 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps4bP46467 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps4bP46467 Iqck-206ENSMUST00000208658 2891 ntBASIC19.69■□□□□ 0.74
Vps4bP46467 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vps4bP46467 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.69■□□□□ 0.74
Vps4bP46467 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.69■□□□□ 0.74
Vps4bP46467 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 Gm9847-201ENSMUST00000052528 599 ntBASIC19.69■□□□□ 0.74
Vps4bP46467 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4bP46467 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms