Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.76■□□□□ 0.59
Sox18P43680 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox18P43680 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox18P43680 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.75■□□□□ 0.59
Sox18P43680 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox18P43680 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sox18P43680 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox18P43680 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox18P43680 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox18P43680 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox18P43680 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox18P43680 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox18P43680 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.73■□□□□ 0.59
Sox18P43680 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sox18P43680 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.73■□□□□ 0.59
Sox18P43680 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sox18P43680 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox18P43680 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox18P43680 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.72■□□□□ 0.59
Sox18P43680 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox18P43680 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sox18P43680 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sox18P43680 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox18P43680 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.72■□□□□ 0.59
Sox18P43680 Gm6365-201ENSMUST00000054711 744 ntBASIC18.72■□□□□ 0.59
Sox18P43680 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox18P43680 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox18P43680 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.72■□□□□ 0.59
Sox18P43680 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox18P43680 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox18P43680 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox18P43680 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox18P43680 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.71■□□□□ 0.59
Sox18P43680 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.71■□□□□ 0.59
Sox18P43680 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.71■□□□□ 0.59
Sox18P43680 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sox18P43680 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sox18P43680 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox18P43680 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox18P43680 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Sox18P43680 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sox18P43680 Trmt13-210ENSMUST00000198454 880 ntBASIC18.7■□□□□ 0.58
Sox18P43680 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox18P43680 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sox18P43680 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox18P43680 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sox18P43680 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.69■□□□□ 0.58
Sox18P43680 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sox18P43680 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox18P43680 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox18P43680 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox18P43680 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sox18P43680 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox18P43680 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms