Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Msh2P43247 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Msh2P43247 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Msh2P43247 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Msh2P43247 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Msh2P43247 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.08■□□□□ 0.81
Msh2P43247 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Msh2P43247 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
Msh2P43247 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Msh2P43247 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Msh2P43247 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Msh2P43247 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msh2P43247 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Msh2P43247 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msh2P43247 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msh2P43247 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msh2P43247 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.07■□□□□ 0.8
Msh2P43247 Gm12922-201ENSMUST00000120626 809 ntBASIC20.07■□□□□ 0.8
Msh2P43247 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.07■□□□□ 0.8
Msh2P43247 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Msh2P43247 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Msh2P43247 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Msh2P43247 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msh2P43247 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.06■□□□□ 0.8
Msh2P43247 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.06■□□□□ 0.8
Msh2P43247 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.06■□□□□ 0.8
Msh2P43247 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.06■□□□□ 0.8
Msh2P43247 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Msh2P43247 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msh2P43247 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Msh2P43247 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh2P43247 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh2P43247 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.05■□□□□ 0.8
Msh2P43247 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh2P43247 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh2P43247 Gm9847-201ENSMUST00000052528 599 ntBASIC20.05■□□□□ 0.8
Msh2P43247 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh2P43247 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Msh2P43247 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Msh2P43247 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Msh2P43247 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Msh2P43247 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Msh2P43247 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh2P43247 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Msh2P43247 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.03■□□□□ 0.8
Msh2P43247 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.03■□□□□ 0.8
Msh2P43247 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
Msh2P43247 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.03■□□□□ 0.8
Msh2P43247 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh2P43247 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Msh2P43247 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh2P43247 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh2P43247 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msh2P43247 Golgb1-201ENSMUST00000023534 498 ntBASIC20.02■□□□□ 0.8
Msh2P43247 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Msh2P43247 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh2P43247 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Msh2P43247 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.02■□□□□ 0.79
Msh2P43247 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Msh2P43247 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.01■□□□□ 0.79
Msh2P43247 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.01■□□□□ 0.79
Msh2P43247 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Msh2P43247 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh2P43247 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Msh2P43247 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms