Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nedd8P29595 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nedd8P29595 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nedd8P29595 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nedd8P29595 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nedd8P29595 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nedd8P29595 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nedd8P29595 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nedd8P29595 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nedd8P29595 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nedd8P29595 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nedd8P29595 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.08■□□□□ 0.48
Nedd8P29595 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nedd8P29595 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Gm11599-201ENSMUST00000118720 878 ntBASIC18.07■□□□□ 0.48
Nedd8P29595 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.07■□□□□ 0.48
Nedd8P29595 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nedd8P29595 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nedd8P29595 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.06■□□□□ 0.48
Nedd8P29595 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nedd8P29595 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nedd8P29595 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Nedd8P29595 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.06■□□□□ 0.48
Nedd8P29595 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.06■□□□□ 0.48
Nedd8P29595 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.06■□□□□ 0.48
Nedd8P29595 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nedd8P29595 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.06■□□□□ 0.48
Nedd8P29595 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.05■□□□□ 0.48
Nedd8P29595 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.05■□□□□ 0.48
Nedd8P29595 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nedd8P29595 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Gm7432-201ENSMUST00000210343 879 ntBASIC18.04■□□□□ 0.48
Nedd8P29595 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nedd8P29595 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nedd8P29595 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nedd8P29595 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.03■□□□□ 0.48
Nedd8P29595 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nedd8P29595 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nedd8P29595 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.03■□□□□ 0.48
Nedd8P29595 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.03■□□□□ 0.48
Nedd8P29595 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.03■□□□□ 0.48
Nedd8P29595 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nedd8P29595 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nedd8P29595 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.02■□□□□ 0.48
Nedd8P29595 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nedd8P29595 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nedd8P29595 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.02■□□□□ 0.48
Nedd8P29595 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nedd8P29595 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nedd8P29595 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nedd8P29595 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms