Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.09■□□□□ 0.33
SnrpbP27048 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SnrpbP27048 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SnrpbP27048 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SnrpbP27048 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SnrpbP27048 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SnrpbP27048 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SnrpbP27048 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.08■□□□□ 0.32
SnrpbP27048 Gm12366-201ENSMUST00000121722 873 ntBASIC17.08■□□□□ 0.32
SnrpbP27048 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.08■□□□□ 0.32
SnrpbP27048 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SnrpbP27048 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.08■□□□□ 0.32
SnrpbP27048 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.08■□□□□ 0.32
SnrpbP27048 Gm5786-201ENSMUST00000085368 882 ntBASIC17.08■□□□□ 0.32
SnrpbP27048 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SnrpbP27048 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SnrpbP27048 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SnrpbP27048 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SnrpbP27048 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.07■□□□□ 0.32
SnrpbP27048 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SnrpbP27048 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SnrpbP27048 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SnrpbP27048 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SnrpbP27048 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
SnrpbP27048 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SnrpbP27048 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SnrpbP27048 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.06■□□□□ 0.32
SnrpbP27048 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
SnrpbP27048 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SnrpbP27048 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SnrpbP27048 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SnrpbP27048 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.05■□□□□ 0.32
SnrpbP27048 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SnrpbP27048 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.05■□□□□ 0.32
SnrpbP27048 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.05■□□□□ 0.32
SnrpbP27048 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SnrpbP27048 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.05■□□□□ 0.32
SnrpbP27048 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SnrpbP27048 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.04■□□□□ 0.32
SnrpbP27048 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.04■□□□□ 0.32
SnrpbP27048 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SnrpbP27048 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.04■□□□□ 0.32
SnrpbP27048 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SnrpbP27048 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.04■□□□□ 0.32
SnrpbP27048 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.04■□□□□ 0.32
SnrpbP27048 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SnrpbP27048 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms