Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col8a2P25318 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Col8a2P25318 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col8a2P25318 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.38■□□□□ 0.21
Col8a2P25318 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.38■□□□□ 0.21
Col8a2P25318 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col8a2P25318 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col8a2P25318 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Col8a2P25318 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Col8a2P25318 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Gm10849-201ENSMUST00000100397 618 ntBASIC16.37■□□□□ 0.21
Col8a2P25318 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.37■□□□□ 0.21
Col8a2P25318 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col8a2P25318 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.37■□□□□ 0.21
Col8a2P25318 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col8a2P25318 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
Col8a2P25318 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.36■□□□□ 0.21
Col8a2P25318 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col8a2P25318 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col8a2P25318 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Col8a2P25318 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col8a2P25318 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col8a2P25318 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col8a2P25318 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Col8a2P25318 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col8a2P25318 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.35■□□□□ 0.21
Col8a2P25318 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Col8a2P25318 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col8a2P25318 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col8a2P25318 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col8a2P25318 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col8a2P25318 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.35■□□□□ 0.21
Col8a2P25318 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col8a2P25318 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.34■□□□□ 0.21
Col8a2P25318 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Col8a2P25318 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.34■□□□□ 0.21
Col8a2P25318 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.34■□□□□ 0.21
Col8a2P25318 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.34■□□□□ 0.21
Col8a2P25318 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col8a2P25318 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col8a2P25318 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.34■□□□□ 0.21
Col8a2P25318 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.34■□□□□ 0.21
Col8a2P25318 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col8a2P25318 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Col8a2P25318 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Col8a2P25318 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col8a2P25318 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col8a2P25318 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col8a2P25318 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col8a2P25318 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Col8a2P25318 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
Col8a2P25318 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col8a2P25318 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col8a2P25318 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col8a2P25318 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col8a2P25318 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col8a2P25318 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.31■□□□□ 0.2
Col8a2P25318 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.31■□□□□ 0.2
Col8a2P25318 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms