Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.24■□□□□ 0.99
Pde6bP23440 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.24■□□□□ 0.99
Pde6bP23440 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.24■□□□□ 0.99
Pde6bP23440 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6bP23440 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pde6bP23440 Gm13234-201ENSMUST00000120010 747 ntBASIC21.23■□□□□ 0.99
Pde6bP23440 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.23■□□□□ 0.99
Pde6bP23440 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Pde6bP23440 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.23■□□□□ 0.99
Pde6bP23440 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.23■□□□□ 0.99
Pde6bP23440 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Pde6bP23440 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pde6bP23440 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pde6bP23440 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.22■□□□□ 0.99
Pde6bP23440 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Pde6bP23440 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Pde6bP23440 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pde6bP23440 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Pde6bP23440 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6bP23440 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.21■□□□□ 0.99
Pde6bP23440 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pde6bP23440 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pde6bP23440 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6bP23440 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pde6bP23440 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Pde6bP23440 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pde6bP23440 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pde6bP23440 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pde6bP23440 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pde6bP23440 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.2■□□□□ 0.98
Pde6bP23440 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.2■□□□□ 0.98
Pde6bP23440 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Gm10602-201ENSMUST00000098239 609 ntBASIC21.2■□□□□ 0.98
Pde6bP23440 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pde6bP23440 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Reep4-203ENSMUST00000226563 1444 ntBASIC21.2■□□□□ 0.98
Pde6bP23440 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6bP23440 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6bP23440 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pde6bP23440 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6bP23440 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6bP23440 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6bP23440 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.19■□□□□ 0.98
Pde6bP23440 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.19■□□□□ 0.98
Pde6bP23440 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pde6bP23440 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6bP23440 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.18■□□□□ 0.98
Pde6bP23440 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pde6bP23440 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.18■□□□□ 0.98
Pde6bP23440 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6bP23440 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pde6bP23440 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pde6bP23440 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pde6bP23440 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.17■□□□□ 0.98
Pde6bP23440 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.17■□□□□ 0.98
Pde6bP23440 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.17■□□□□ 0.98
Pde6bP23440 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms