Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.71■□□□□ 0.43
Cbx3P23198 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cbx3P23198 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cbx3P23198 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cbx3P23198 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cbx3P23198 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.71■□□□□ 0.43
Cbx3P23198 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Cbx3P23198 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Cbx3P23198 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cbx3P23198 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cbx3P23198 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cbx3P23198 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cbx3P23198 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cbx3P23198 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cbx3P23198 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cbx3P23198 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cbx3P23198 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cbx3P23198 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cbx3P23198 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.68■□□□□ 0.42
Cbx3P23198 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Cbx3P23198 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cbx3P23198 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cbx3P23198 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cbx3P23198 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.66■□□□□ 0.42
Cbx3P23198 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.66■□□□□ 0.42
Cbx3P23198 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cbx3P23198 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cbx3P23198 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cbx3P23198 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cbx3P23198 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cbx3P23198 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.66■□□□□ 0.42
Cbx3P23198 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cbx3P23198 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cbx3P23198 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.65■□□□□ 0.42
Cbx3P23198 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cbx3P23198 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cbx3P23198 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.65■□□□□ 0.42
Cbx3P23198 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cbx3P23198 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cbx3P23198 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.64■□□□□ 0.41
Cbx3P23198 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cbx3P23198 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cbx3P23198 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Cbx3P23198 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cbx3P23198 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Cbx3P23198 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.63■□□□□ 0.41
Cbx3P23198 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms