Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RarbP22605 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RarbP22605 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RarbP22605 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RarbP22605 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RarbP22605 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RarbP22605 Gm22240-201ENSMUST00000175225 82 ntBASIC21.68■■□□□ 1.06
RarbP22605 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RarbP22605 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RarbP22605 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RarbP22605 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RarbP22605 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.67■■□□□ 1.06
RarbP22605 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.67■■□□□ 1.06
RarbP22605 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.67■■□□□ 1.06
RarbP22605 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RarbP22605 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RarbP22605 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RarbP22605 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Gm13146-201ENSMUST00000118508 780 ntBASIC21.66■■□□□ 1.06
RarbP22605 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.66■■□□□ 1.06
RarbP22605 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.66■■□□□ 1.06
RarbP22605 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RarbP22605 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.66■■□□□ 1.06
RarbP22605 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RarbP22605 Gm7290-201ENSMUST00000104990 617 ntBASIC21.65■■□□□ 1.06
RarbP22605 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RarbP22605 Gm12918-201ENSMUST00000120234 636 ntBASIC21.65■■□□□ 1.06
RarbP22605 Gm15710-201ENSMUST00000121821 636 ntBASIC21.65■■□□□ 1.06
RarbP22605 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.65■■□□□ 1.06
RarbP22605 Gm5075-201ENSMUST00000196916 622 ntBASIC21.65■■□□□ 1.06
RarbP22605 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.65■■□□□ 1.06
RarbP22605 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.65■■□□□ 1.06
RarbP22605 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.65■■□□□ 1.06
RarbP22605 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RarbP22605 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RarbP22605 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RarbP22605 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RarbP22605 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RarbP22605 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RarbP22605 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RarbP22605 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RarbP22605 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RarbP22605 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RarbP22605 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RarbP22605 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.63■■□□□ 1.05
RarbP22605 Gm5408-201ENSMUST00000197998 747 ntBASIC21.63■■□□□ 1.05
RarbP22605 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RarbP22605 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RarbP22605 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
RarbP22605 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RarbP22605 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RarbP22605 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RarbP22605 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.62■■□□□ 1.05
RarbP22605 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RarbP22605 Gm12527-201ENSMUST00000117967 564 ntBASIC21.62■■□□□ 1.05
RarbP22605 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RarbP22605 Gm8520-201ENSMUST00000186517 868 ntBASIC21.62■■□□□ 1.05
RarbP22605 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.62■■□□□ 1.05
RarbP22605 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RarbP22605 Gm6365-201ENSMUST00000054711 744 ntBASIC21.62■■□□□ 1.05
RarbP22605 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
RarbP22605 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RarbP22605 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RarbP22605 Gm13148-201ENSMUST00000118892 745 ntBASIC21.61■■□□□ 1.05
RarbP22605 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RarbP22605 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RarbP22605 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RarbP22605 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RarbP22605 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RarbP22605 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RarbP22605 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RarbP22605 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RarbP22605 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.59■■□□□ 1.05
RarbP22605 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RarbP22605 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms