Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd44P15379 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.56■□□□□ 0.88
Cd44P15379 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd44P15379 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.56■□□□□ 0.88
Cd44P15379 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd44P15379 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd44P15379 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cd44P15379 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd44P15379 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd44P15379 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.55■□□□□ 0.88
Cd44P15379 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd44P15379 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cd44P15379 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.55■□□□□ 0.88
Cd44P15379 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cd44P15379 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Cd44P15379 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd44P15379 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd44P15379 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd44P15379 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 AA386476-201ENSMUST00000098781 1665 ntBASIC20.54■□□□□ 0.88
Cd44P15379 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.54■□□□□ 0.88
Cd44P15379 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd44P15379 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cd44P15379 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cd44P15379 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cd44P15379 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
Cd44P15379 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd44P15379 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd44P15379 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.52■□□□□ 0.87
Cd44P15379 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cd44P15379 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.51■□□□□ 0.87
Cd44P15379 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.51■□□□□ 0.87
Cd44P15379 Gm9959-201ENSMUST00000068277 390 ntBASIC20.51■□□□□ 0.87
Cd44P15379 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.51■□□□□ 0.87
Cd44P15379 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.51■□□□□ 0.87
Cd44P15379 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd44P15379 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd44P15379 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd44P15379 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd44P15379 Gm15546-201ENSMUST00000122095 826 ntBASIC20.5■□□□□ 0.87
Cd44P15379 Gm22238-201ENSMUST00000175222 88 ntBASIC20.5■□□□□ 0.87
Cd44P15379 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd44P15379 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd44P15379 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
Cd44P15379 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cd44P15379 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cd44P15379 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd44P15379 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd44P15379 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.48■□□□□ 0.87
Cd44P15379 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cd44P15379 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cd44P15379 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.48■□□□□ 0.87
Cd44P15379 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd44P15379 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cd44P15379 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd44P15379 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd44P15379 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.48■□□□□ 0.87
Cd44P15379 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.47■□□□□ 0.87
Cd44P15379 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.47■□□□□ 0.87
Cd44P15379 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd44P15379 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms