Protein–RNA interactions for Protein: P13516

Scd1, Acyl-CoA desaturase 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scd1P13516 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scd1P13516 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scd1P13516 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scd1P13516 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Scd1P13516 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scd1P13516 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scd1P13516 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.31■□□□□ 0.68
Scd1P13516 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scd1P13516 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scd1P13516 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.31■□□□□ 0.68
Scd1P13516 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scd1P13516 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scd1P13516 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scd1P13516 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.3■□□□□ 0.68
Scd1P13516 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Scd1P13516 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scd1P13516 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scd1P13516 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Scd1P13516 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scd1P13516 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scd1P13516 Gm7417-201ENSMUST00000192950 473 ntBASIC19.28■□□□□ 0.68
Scd1P13516 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.28■□□□□ 0.68
Scd1P13516 Gm15820-201ENSMUST00000201566 728 ntBASIC19.28■□□□□ 0.68
Scd1P13516 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scd1P13516 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scd1P13516 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scd1P13516 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Scd1P13516 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scd1P13516 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scd1P13516 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scd1P13516 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.26■□□□□ 0.67
Scd1P13516 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.26■□□□□ 0.67
Scd1P13516 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scd1P13516 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scd1P13516 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.26■□□□□ 0.67
Scd1P13516 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scd1P13516 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scd1P13516 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scd1P13516 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Scd1P13516 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Scd1P13516 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scd1P13516 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scd1P13516 AA386476-201ENSMUST00000098781 1665 ntBASIC19.24■□□□□ 0.67
Scd1P13516 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
Scd1P13516 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Scd1P13516 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scd1P13516 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.22■□□□□ 0.67
Scd1P13516 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms