Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm5075-201ENSMUST00000196916 622 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Gm6365-201ENSMUST00000054711 744 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl3P10855 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl3P10855 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl3P10855 Gm6420-201ENSMUST00000193885 723 ntBASIC17.37■□□□□ 0.37
Ccl3P10855 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccl3P10855 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl3P10855 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccl3P10855 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl3P10855 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccl3P10855 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccl3P10855 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccl3P10855 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccl3P10855 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccl3P10855 Gm5408-201ENSMUST00000197998 747 ntBASIC17.36■□□□□ 0.37
Ccl3P10855 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ccl3P10855 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ccl3P10855 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl3P10855 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl3P10855 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccl3P10855 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ccl3P10855 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccl3P10855 Gm12527-201ENSMUST00000117967 564 ntBASIC17.35■□□□□ 0.37
Ccl3P10855 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccl3P10855 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccl3P10855 Gm20760-201ENSMUST00000179197 648 ntBASIC17.35■□□□□ 0.37
Ccl3P10855 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.35■□□□□ 0.37
Ccl3P10855 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl3P10855 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccl3P10855 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccl3P10855 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccl3P10855 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccl3P10855 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccl3P10855 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl3P10855 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ccl3P10855 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccl3P10855 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccl3P10855 AA386476-201ENSMUST00000098781 1665 ntBASIC17.33■□□□□ 0.37
Ccl3P10855 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccl3P10855 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccl3P10855 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.33■□□□□ 0.36
Ccl3P10855 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.33■□□□□ 0.36
Ccl3P10855 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccl3P10855 Gm13534-201ENSMUST00000121169 513 ntBASIC17.33■□□□□ 0.36
Ccl3P10855 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccl3P10855 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.33■□□□□ 0.36
Ccl3P10855 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccl3P10855 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl3P10855 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccl3P10855 Gm22240-201ENSMUST00000175225 82 ntBASIC17.32■□□□□ 0.36
Ccl3P10855 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccl3P10855 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccl3P10855 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccl3P10855 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl3P10855 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Ccl3P10855 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.31■□□□□ 0.36
Ccl3P10855 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms