Protein–RNA interactions for Protein: P0DM65

Becn2, Beclin-2, mousemouse

Predictions only

Length 447 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn2P0DM65 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Becn2P0DM65 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Becn2P0DM65 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Becn2P0DM65 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.45■□□□□ 0.86
Becn2P0DM65 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Becn2P0DM65 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Becn2P0DM65 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.44■□□□□ 0.86
Becn2P0DM65 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.44■□□□□ 0.86
Becn2P0DM65 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Becn2P0DM65 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.44■□□□□ 0.86
Becn2P0DM65 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Becn2P0DM65 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.43■□□□□ 0.86
Becn2P0DM65 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Becn2P0DM65 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.43■□□□□ 0.86
Becn2P0DM65 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.43■□□□□ 0.86
Becn2P0DM65 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Becn2P0DM65 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Becn2P0DM65 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Becn2P0DM65 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Becn2P0DM65 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Becn2P0DM65 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.41■□□□□ 0.86
Becn2P0DM65 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.41■□□□□ 0.86
Becn2P0DM65 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Becn2P0DM65 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Becn2P0DM65 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.4■□□□□ 0.86
Becn2P0DM65 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.4■□□□□ 0.86
Becn2P0DM65 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.4■□□□□ 0.86
Becn2P0DM65 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Becn2P0DM65 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Becn2P0DM65 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Becn2P0DM65 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Becn2P0DM65 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.39■□□□□ 0.85
Becn2P0DM65 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Becn2P0DM65 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Becn2P0DM65 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Becn2P0DM65 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Becn2P0DM65 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Becn2P0DM65 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Becn2P0DM65 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Becn2P0DM65 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Becn2P0DM65 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.36■□□□□ 0.85
Becn2P0DM65 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Becn2P0DM65 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.36■□□□□ 0.85
Becn2P0DM65 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Becn2P0DM65 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Becn2P0DM65 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Becn2P0DM65 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Becn2P0DM65 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms